PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Thecc1EG044596t4
Common NameTCM_044596
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
Family bZIP
Protein Properties Length: 323aa    MW: 35918.3 Da    PI: 8.6625
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Thecc1EG044596t4genomeCGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_142.11.9e-13250298451
                       XCHHHCHHHHHHHHHHHHHHHHH.HHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   4 lkrerrkqkNReAArrsRqRKka.eieeLeekvkeLeaeNkaLkkelee 51 
                       ++r++r++kNRe+A rsR+RK++ ++ eLe+kv  Le+eN +Lk++ e+
  Thecc1EG044596t4 250 DRRQKRMIKNRESAARSRARKQQaYTNELENKVSRLEEENARLKDRKEQ 298
                       79*******************7549******************977554 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.0E-11241297No hitNo description
SMARTSM003384.6E-8247320IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.76249298IPR004827Basic-leucine zipper domain
PfamPF001702.5E-11250300IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.13E-8251298No hitNo description
CDDcd147071.23E-21251306No hitNo description
PROSITE patternPS000360254269IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    Send to blast
MGIQTMVSQG DSGSNGKESQ FQQLTRQNSM YSLTLDEVQN QLGDLGKPLS SMNLDELLKN  60
VWTAEANQNY GMETEGTALT NQTALQRQSS LSLTSALSKK TVDEVWRDIQ QSKNDGEKKY  120
RERQPTLGEM TLEDFLVKAG VVAEASTDKK GGGSVAGVDL SVAPQFAQQG QWMQYPQPQY  180
QHPQQSLMGV YMSAQPMPQP LTIGATAVMD VSYPDNQVPL PSPLMGTLSD TQASGRKRGA  240
PEDMIEKNVD RRQKRMIKNR ESAARSRARK QQAYTNELEN KVSRLEEENA RLKDRKEQEM  300
KLPSAPPPEP KYQLRRTSSA PF*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1289297ARLKDRKEQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00409DAPTransfer from AT3G56850Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007010668.10.0BZIP domain class transcription factor isoform 4
SwissprotQ9LES35e-95AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBLA0A061FRD00.0A0A061FRD0_THECC; BZIP domain class transcription factor isoform 4
STRINGPOPTR_0008s01130.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM18842883
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.19e-75ABA-responsive element binding protein 3
Publications ? help Back to Top
  1. Motamayor JC, et al.
    The genome sequence of the most widely cultivated cacao type and its use to identify candidate genes regulating pod color.
    Genome Biol., 2013. 14(6): p. r53
    [PMID:23731509]